8-bit ND2 files stretch bug
Open
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- Dominant language
- Java
- Stars
- 786
- Forks
- 267
- PR merge metrics
- No merged PRs in 30d
Description
Some ND2 files (acquired with NIS elements software, Nikon) in 8-bit at certain resolutions (e.g. 1066x590, 1277x1021) look stretched when opened in Fiji (attached image – left opened in Fiji, right the same image in NIS-Elements).
The files contain multiple time points (fast timelapses).
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No source file, test, or entry point is identified. Start by reproducing the display problem in Fiji with an affected 8-bit, multi-timepoint ND2 file at one of the reported resolutions, then compare the rendered dimensions with NIS-Elements; done means those files no longer appear stretched.
Written by the indexing model from the issue text.
Assessment
- Domain
- computer-vision
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100