feat(Execution workflow): LABRAT feature to reuse previous makeTFfasta output
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enhancement
low priority
- Dominant language
- Python
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Description
Labrat takes very long time to run in its current implementation of the execution workflow. This is because the [makeTFfasta](https://github.com/TaliaferroLab/LABRAT#maketffasta) step takes several days (~3.5 when I ran it). The subsequent Salmon steps take next to no time to run. It would be a useful feature to allow users to pass to the execution workflow the result of the `makeTFfasta` step from a previous execution to speed things up. The `makeTFfasta` step should only have to be run once per annotation version.
Any thoughts on this possibility @yuukiiwa or @dominikburri ?
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