iRNA-COSI / iRNA-COSI/APAeval

feat(Summary workflows): Differential summary workflow

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Description

## Child Issues:
Backbone: https://github.com/iRNA-COSI/APAeval/issues/292
Metrics POC: https://github.com/iRNA-COSI/APAeval/issues/293
Metrics implementation: https://github.com/iRNA-COSI/APAeval/issues/295
Testing: https://github.com/iRNA-COSI/APAeval/issues/296

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