iRNA-COSI / iRNA-COSI/APAeval

feat(Utils): BAM to FASTQ

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#209 3 comments 0 reactions 1 assignee Claimed by @mrgazzara View on GitHub
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Description

In `tests/test_data/` files for testing execution workflows are present.

When trying to use it for LABRAT (see PR #200 ) to test differential usage I noticed that one is missing.
LABRAT uses FASTQ files, but the control file `siControl_R1_2genes.fq.gz` is missing. `siSrsf3_R1_100genes.fastq.gz` is apparent and would be used as the other condition.

Could this be added? That would facilitate to create a working samplesheet for ewf's using FASTQ files as input.

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