higlass / higlass/higlass-docker
Error retrieving tilesetInfo from: /api/v1
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Description
Hey guys, I was following the introduction on how to set up the local Higlass and got it run with the example dataset in the tutorial of Higlass docker: https://github.com/higlass/higlass-docker
However, when I tried to load my own dataset to Higlass, I encountered the error message as shown in the title of this post.
I also went back to the terminal end to see what happened, I found if I ingest the data in the tutorial, when I use the curl command to retrieve the information, it works well.
But if I ingest my own data and tried to find the information with the curl command, I also encounter another error.
here is the detail:
jiangxu$ curl http://localhost:8888/api/v1/tilesets/
{"count":2,"next":null,"previous":null,"results":[{"uuid":"JSjAlQH2QB6g_amkwsCpBQ","datafile":"http://localhost:8888/api/v1/tilesets/media/uploads/CTCC_SDS_HindIII_10k_balanced_sorted_HeRuS8m.cool","filetype":"cooler","datatype":"matrix","name":"CTCC_SDS_HindIII_10k_balanced_sorted.cool","coordSystem":"","coordSystem2":"","created":"2019-11-15T13:51:29.603898Z","project":"U_mj54GkTB2tCtZ1UxeNNQ","project_name":"","description":"","private":false},{"uuid":"HvoNHOapQBiWVQ02hxA3Zw","datafile":"http://localhost:8888/api/v1/tilesets/media/uploads/dixon2012-h1hesc-hindiii-allreps-filtered.1000kb.multires_jlfN230.cool","filetype":"cooler","datatype":"matrix","name":"dixon2012-h1hesc-hindiii-allreps-filtered.1000kb.multires.cool","coordSystem":"","coordSystem2":"","created":"2019-11-15T14:00:22.264898Z","project":"U_mj54GkTB2tCtZ1UxeNNQ","project_name":"","description":"","private":false}]}(base) Jiangs-MacBook-Pro:hg-tmp jiangxu$ curl http://localhost:8888/api/v1/tileset_info/?d=HvoNHOapQBiWVQ02hxA3Zw
{"HvoNHOapQBiWVQ02hxA3Zw": {"min_pos": [0, 0], "max_pos": [3095693983, 3095693983], "max_zoom": 4, "max_width": 4096000000, "bins_per_dimension": 256, "transforms": [{"name": "ICE", "value": "weight"}], "chromsizes": [["chr1", 249250621], ["chr2", 243199373], ["chr3", 198022430], ["chr4", 191154276], ["chr5", 180915260], ["chr6", 171115067], ["chr7", 159138663], ["chr8", 146364022], ["chr9", 141213431], ["chr10", 135534747], ["chr11", 135006516], ["chr12", 133851895], ["chr13", 115169878], ["chr14", 107349540], ["chr15", 102531392], ["chr16", 90354753], ["chr17", 81195210], ["chr18", 78077248], ["chr19", 59128983], ["chr20", 63025520], ["chr21", 48129895], ["chr22", 51304566], ["chrX", 155270560], ["chrY", 59373566], ["chrM", 16571]], "name": "dixon2012-h1hesc-hindiii-allreps-filtered.1000kb.multires.cool", "datatype": "matrix", "coordSystem": "", "coordSystem2": ""}}(base) Jiangs-MacBook-Pro:hg-tmp jiangxu$ curl http://localhost:8888/api/v1/tileset_info/?d=JSjAlQH2QB6g_amkwsCpBQ
Server Error (500)
(base) Jiangs-MacBook-Pro:hg-tmp jiangxu$The data set I encountered the error was generated from the 'cooler cload pairix' of the cooler package.
Could you guys help me to solve the problem. Thank you!
Best!
Jiang
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