griffithlab / griffithlab/pVACtools
Add NetH2pan to the list of supported prediction algorithms
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prediction_algorithms
- Dominant language
- Python
- Stars
- 188
- Forks
- 81
- Avg merge
- 9d 17h
- Merged PRs (30d)
- 6
Description
Would it be possible to add NetH2pan as a supported epitope prediction algorithm? NetH2pan is a standard benchmark/tool for MHC class I binding affinity predictions in mice.
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files, tests, or entry point. Start by locating where supported prediction algorithms are registered and compare the integration requirements for NetH2pan; done means it is exposed as a supported option with appropriate verification.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- machine-learning
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100