greenelab / greenelab/tribe

Annotation refinery is taking too long to load all of the GO, KEGG and DO sets to Tribe.

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#5 2 comments 0 reactions 0 assignees View on GitHub
backlog
Dominant language
Python
Stars
3
Forks
3
PR merge metrics
No merged PRs in 30d

Description

Could be a memory issue? Seems that Tribe is having problems handling the large amount of POST requests. During this time, even the load time in https://tribe.greenelab.com/#/use/list is very long.

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by reproducing the slow load at the reported Tribe URL while loading the GO, KEGG, and DO sets. Inspect how the server handles the large number of POST requests and measure memory use and request timing. Done means the sets load without the reported excessive delay or apparent memory problem.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
api, backend, performance
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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