Support Python versions 3.10 and 3.11.

In our CI, we're facing a strange instance of this Beam error: https://github.com/apache/beam/issues/24685. The main difference is that the tuple error is happening in a Beam core library as opposed to our code.

full CI stack trace

```
Current runner version: '2.305.0'
Operating System
Runner Image
Runner Image Provisioner
GITHUB_TOKEN Permissions
Secret source: Actions
Prepare workflow directory
Prepare all required actions
Getting action download info
Download action repository 'styfle/cancel-workflow-action@0.7.0' (SHA:d7e57e26a6f753933f8ef746a37097a61375236b)
Download action repository 'actions/checkout@v2' (SHA:ee0669bd1cc54295c223e0bb666b733df41de1c5)
Download action repository 'actions/setup-python@v2' (SHA:e9aba2c848f5ebd159c070c61ea2c4e2b122355e)
Download action repository 'actions/cache@v2' (SHA:8492260343ad570701412c2f464a5877dc76bace)
Complete job name: python 3.10
1s
Run styfle/cancel-workflow-action@0.7.0
{
eventName: 'pull_request',
sha: '3b1965eacb8b89a72c0032563b975235af8b8b51',
headSha: '00f399e9300b0ea0240b87775b710e8948e4a88a',
branch: 'fix-ci',
owner: 'google-research',
repo: 'weatherbench2',
GITHUB_RUN_ID: '5424426117'
}
Found token: yes
Found workflow_id: ["60289397"]
Found 9 runs for workflow 60289397 on branch fix-ci
- https://github.com/google-research/weatherbench2/actions/runs/5424426117
- https://github.com/google-research/weatherbench2/actions/runs/5424167753
- https://github.com/google-research/weatherbench2/actions/runs/5424101963
- https://github.com/google-research/weatherbench2/actions/runs/5423643747
- https://github.com/google-research/weatherbench2/actions/runs/5423620908
- https://github.com/google-research/weatherbench2/actions/runs/5423566572
- https://github.com/google-research/weatherbench2/actions/runs/5423536140
- https://github.com/google-research/weatherbench2/actions/runs/5417986316
- https://github.com/google-research/weatherbench2/actions/runs/5417974464
with 0 runs to cancel.

Cancel Complete.
0s
Run actions/checkout@v2
Syncing repository: google-research/weatherbench2
Getting Git version info
Temporarily overriding HOME='/home/runner/work/_temp/bd922b4a-e386-4ff7-b92a-76b2232f859b' before making global git config changes
Adding repository directory to the temporary git global config as a safe directory
/usr/bin/git config --global --add safe.directory /home/runner/work/weatherbench2/weatherbench2
Deleting the contents of '/home/runner/work/weatherbench2/weatherbench2'
Initializing the repository
Disabling automatic garbage collection
Setting up auth
Fetching the repository
Determining the checkout info
Checking out the ref
/usr/bin/git log -1 --format='%H'
'3b1965eacb8b89a72c0032563b975235af8b8b51'
0s
Run actions/setup-python@v2
Successfully setup CPython (3.10.12)
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Run python -m pip install --upgrade pip wheel
Requirement already satisfied: pip in /opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages (23.0.1)
Collecting pip
Downloading pip-23.1.2-py3-none-any.whl (2.1 MB)
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Installing collected packages: wheel, pip
Attempting uninstall: pip
Found existing installation: pip 23.0.1
Uninstalling pip-23.0.1:
Successfully uninstalled pip-23.0.1
Successfully installed pip-23.1.2 wheel-0.40.0
Warning: The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
5s
Run actions/cache@v2
Received 0 of 182212188 (0.0%), 0.0 MBs/sec
Received 71303168 of 182212188 (39.1%), 34.0 MBs/sec
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Received 182212188 of 182212188 (100.0%), 54.0 MBs/sec
Cache Size: ~174 MB (182212188 B)
/usr/bin/tar -z -xf /home/runner/work/_temp/a2769980-6ee8-4c39-82f1-af64f5788718/cache.tgz -P -C /home/runner/work/weatherbench2/weatherbench2
Cache restored successfully
Cache restored from key: Linux-pip-f504613d018b41047ccca1f8208e59f2a77e51c5c960d98d6378da6462cccbe9
51s
Run pip install -e .[tests]
Obtaining file:///home/runner/work/weatherbench2/weatherbench2
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Checking if build backend supports build_editable: started
Checking if build backend supports build_editable: finished with status 'done'
Getting requirements to build editable: started
Getting requirements to build editable: finished with status 'done'
Preparing editable metadata (pyproject.toml): started
Preparing editable metadata (pyproject.toml): finished with status 'done'
Collecting apache-beam>=2.31.0 (from weatherbench2==0.0.0)
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Collecting pillow>=7.1.0 (from bokeh>=2.4.2->dask->xarray-beam->weatherbench2==0.0.0)
Downloading Pillow-9.5.0-cp310-cp310-manylinux_2_28_x86_64.whl (3.4 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.4/3.4 MB 66.8 MB/s eta 0:00:00
Collecting tornado>=5.1 (from bokeh>=2.4.2->dask->xarray-beam->weatherbench2==0.0.0)
Using cached tornado-6.3.2-cp38-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (426 kB)
Collecting xyzservices>=2021.09.1 (from bokeh>=2.4.2->dask->xarray-beam->weatherbench2==0.0.0)
Using cached xyzservices-2023.5.0-py3-none-any.whl (56 kB)
Collecting MarkupSafe>=2.0 (from jinja2>=2.10.3->dask->xarray-beam->weatherbench2==0.0.0)
Downloading MarkupSafe-2.1.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB)
Building wheels for collected packages: weatherbench2, crcmod, dill, asciitree, docopt
Building editable for weatherbench2 (pyproject.toml): started
Building editable for weatherbench2 (pyproject.toml): finished with status 'done'
Created wheel for weatherbench2: filename=weatherbench2-0.0.0-0.editable-py3-none-any.whl size=6773 sha256=164911e8befd36119b7e57a2021ceb4586512b9da9ccb4d20990f8465e5eb099
Stored in directory: /tmp/pip-ephem-wheel-cache-g5dqibvr/wheels/90/a1/a6/b9aa6c0c3e1aeb1058a43dbec03a7c4bf8521da3c166a1c07c
Building wheel for crcmod (setup.py): started
Building wheel for crcmod (setup.py): finished with status 'done'
Created wheel for crcmod: filename=crcmod-1.7-cp310-cp310-linux_x86_64.whl size=31459 sha256=f7b3db2c0770bc7eaeda3a1e5bc8f800bab194b76a37c936dba1977385fea68b
Stored in directory: /home/runner/.cache/pip/wheels/85/4c/07/72215c529bd59d67e3dac29711d7aba1b692f543c808ba9e86
Building wheel for dill (setup.py): started
Building wheel for dill (setup.py): finished with status 'done'
Created wheel for dill: filename=dill-0.3.1.1-py3-none-any.whl size=78545 sha256=063f795e4bd76039416ce7ed0acd48c66fb8fd3857424d1bd5012d6a5cd30507
Stored in directory: /home/runner/.cache/pip/wheels/ea/e2/86/64980d90e297e7bf2ce588c2b96e818f5399c515c4bb8a7e4f
Building wheel for asciitree (setup.py): started
Building wheel for asciitree (setup.py): finished with status 'done'
Created wheel for asciitree: filename=asciitree-0.3.3-py3-none-any.whl size=5034 sha256=84abc6df592b5473bbb1e7730bd0069cb898f28061504ab0a9680ec4023380c1
Stored in directory: /home/runner/.cache/pip/wheels/7f/4e/be/1171b40f43b918087657ec57cf3b81fa1a2e027d8755baa184
Building wheel for docopt (setup.py): started
Building wheel for docopt (setup.py): finished with status 'done'
Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13707 sha256=f249a12506db1b03b01a2647d08803a332aedd298a3c3fa7502fb72667e54787
Stored in directory: /home/runner/.cache/pip/wheels/fc/ab/d4/5da2067ac95b36618c629a5f93f809425700506f72c9732fac
Successfully built weatherbench2 crcmod dill asciitree docopt
Installing collected packages: pytz, docopt, crcmod, asciitree, zstandard, zipp, xyzservices, urllib3, typing-extensions, tornado, toolz, tomli, six, regex, pyyaml, pyparsing, protobuf, pluggy, pillow, packaging, orjson, objsize, numpy, mypy-extensions, MarkupSafe, locket, iniconfig, immutabledict, idna, grpcio, fsspec, fasteners, fastavro, exceptiongroup, entrypoints, dnspython, dill, cloudpickle, click, charset-normalizer, certifi, absl-py, scipy, requests, python-dateutil, pytest, pymongo, pydot, pyarrow, proto-plus, partd, numcodecs, jinja2, importlib-metadata, httplib2, contourpy, zarr, pandas, hdfs, dask, xarray, bokeh, apache-beam, rechunker, xarray-beam, weatherbench2
Successfully installed MarkupSafe-2.1.3 absl-py-1.4.0 apache-beam-2.48.0 asciitree-0.3.3 bokeh-3.2.0 certifi-2023.5.7 charset-normalizer-3.1.0 click-8.1.3 cloudpickle-2.2.1 contourpy-1.1.0 crcmod-1.7 dask-2023.6.1 dill-0.3.1.1 dnspython-2.3.0 docopt-0.6.2 entrypoints-0.4 exceptiongroup-1.1.1 fastavro-1.7.4 fasteners-0.18 fsspec-2023.6.0 grpcio-1.56.0 hdfs-2.7.0 httplib2-0.22.0 idna-3.4 immutabledict-2.2.4 importlib-metadata-6.7.0 iniconfig-2.0.0 jinja2-3.1.2 locket-1.0.0 mypy-extensions-1.0.0 numcodecs-0.11.0 numpy-1.24.4 objsize-0.6.1 orjson-3.9.1 packaging-23.1 pandas-1.3.5 partd-1.4.0 pillow-9.5.0 pluggy-1.2.0 proto-plus-1.22.3 protobuf-4.23.3 pyarrow-11.0.0 pydot-1.4.2 pymongo-4.4.0 pyparsing-3.1.0 pytest-7.4.0 python-dateutil-2.8.2 pytz-2023.3 pyyaml-6.0 rechunker-0.5.1 regex-2023.6.3 requests-2.31.0 scipy-1.11.1 six-1.16.0 tomli-2.0.1 toolz-0.12.0 tornado-6.3.2 typing-extensions-4.7.0 urllib3-2.0.3 weatherbench2-0.0.0 xarray-2023.1.0 xarray-beam-0.6.2 xyzservices-2023.5.0 zarr-2.15.0 zipp-3.15.0 zstandard-0.21.0
4s
Run pytest weatherbench2
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-7.4.0, pluggy-1.2.0
rootdir: /home/runner/work/weatherbench2/weatherbench2
collected 39 items / 1 error

==================================== ERRORS ====================================
______________ ERROR collecting weatherbench2/evaluation_test.py _______________
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/runner.py:341: in from_call
result: Optional[TResult] = func()
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/runner.py:372: in
call = CallInfo.from_call(lambda: list(collector.collect()), "collect")
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/python.py:531: in collect
self._inject_setup_module_fixture()
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/python.py:545: in _inject_setup_module_fixture
self.obj, ("setUpModule", "setup_module")
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/python.py:310: in obj
self._obj = obj = self._getobj()
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/python.py:528: in _getobj
return self._importtestmodule()
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/python.py:617: in _importtestmodule
mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/pathlib.py:565: in import_path
importlib.import_module(module_name)
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
:1050: in _gcd_import
???
:1027: in _find_and_load
???
:1006: in _find_and_load_unlocked
???
:688: in _load_unlocked
???
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/_pytest/assertion/rewrite.py:178: in exec_module
exec(co, module.__dict__)
weatherbench2/evaluation_test.py:19: in
from weatherbench2 import evaluation
weatherbench2/evaluation.py:29: in
import apache_beam as beam
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/__init__.py:88: in
from apache_beam import io
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/io/__init__.py:21: in
from apache_beam.io.avroio import *
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/io/avroio.py:53: in
from apache_beam.io import filebasedsink
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/io/filebasedsink.py:29: in
from apache_beam.io import iobase
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/io/iobase.py:54: in
from apache_beam.transforms import Impulse
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/transforms/__init__.py:22: in
from apache_beam.transforms import combiners
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/transforms/combiners.py:39: in
from apache_beam.transforms import core
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/transforms/core.py:2945: in
@typehints.with_input_types(typing.Tuple[K, V])
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/typehints/decorators.py:772: in with_input_types
native_type_compatibility.convert_to_beam_types(positional_hints))
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/typehints/native_type_compatibility.py:370: in convert_to_beam_types
return [convert_to_beam_type(v) for v in args]
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/typehints/native_type_compatibility.py:370: in
return [convert_to_beam_type(v) for v in args]
/opt/hostedtoolcache/Python/3.10.12/x64/lib/python3.10/site-packages/apache_beam/typehints/native_type_compatibility.py:342: in convert_to_beam_type
raise ValueError(
E ValueError: expecting type typing.Tuple[~K, ~V] to have arity 0, had arity 2 instead
=========================== short test summary info ============================
ERROR weatherbench2/evaluation_test.py - ValueError: expecting type typing.Tuple[~K, ~V] to have arity 0, had arity 2 instead
!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
=============================== 1 error in 2.47s ===============================
Error: Process completed with exit code 2.
```

Once the tuple/arity bug is fixed, we'll upgrade our CI to support versions 3.10 and 3.11 of Python.

Start with the GitHub Actions workflow shown in the trace, especially the actions/setup-python step and the pip install -e .[tests] command. Check the package dependency metadata and run the test installation and suite on Python 3.10 and 3.11; done means both CI jobs complete without the reported Beam-related failure.

Written by the indexing model from the issue text.