google-deepmind / google-deepmind/alphafold

Is the AlphaFold2 PDB structures available for download predicted using the UniProt canonical sequence?

Open
#957 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
14.9k
Forks
2.9k
PR merge metrics
No merged PRs in 30d

Description

Hi! I've download the compressed prediction files for model organism proteomes for Homo sapiens through this link https://ftp.ebi.ac.uk/pub/databases/alphafold/latest/UP000005640_9606_HUMAN_v4.tar, I wonder, is the AlphaFold2 PDB structures available for download predicted using the UniProt canonical sequences? Or most part of the structures were predicted using the UniProt canonical sequences, there were still some UniProt isoform sequences? Could the relevant information be found in the article "Highly accurate protein structure prediction with AlphaFold" or on the website (https://alphafold.ebi.ac.uk/)?

Contributor guide

Open the contributing guide

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.