google-deepmind / google-deepmind/alphafold
AlphaFold Colab runs keep getting stuck at AMBER relaxation step
Open
colab
relax
- Dominant language
- Python
- Stars
- 14.9k
- Forks
- 2.9k
- PR merge metrics
- No merged PRs in 30d
Description
AlphaFold Colab runs keep getting stuck at AMBER relaxation step. Runtime type: Python 3; hardware accelerator: T4 GPU.
AMBER relaxation: 83% 5/6 [elapsed: 30:18 remaining: 06:00]
WARNING:root:Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Sometimes completes the run; other times it crashes.
Contributor guide
Assessment
This issue has not been assessed yet.