google-deepmind / google-deepmind/alphafold
"TypeError: HTTPConnection.request() got an unexpected keyword argument 'chunked'" error while running AlphaFold
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Description
Dear AlphaFold users and/or developers,
I'm struggling to find the root cause of two error messages
"File "/home/rloureiro/alphafold/alphafold-env/lib/python3.10/site-packages/urllib3/connectionpool.py", line 497, in _make_request
conn.request(
TypeError: HTTPConnection.request() got an unexpected keyword argument 'chunked'" and "During handling of the above exception, another exception occurred: File "/home/rloureiro/alphafold/alphafold-env/lib/python3.10/site-packages/docker/api/client.py", line 221, in _retrieve_server_version
raise DockerException(
docker.errors.DockerException: Error while fetching server API version: HTTPConnection.request() got an unexpected keyword argument 'chunked'"
while trying to run AlphaFold on a local machine with Ubuntu 22.04 LTS, CUDA 12.2 and the compatible latest version of Docker. I installed AlphaFold dependencies and tried to run AlphaFold on a Python environment having Python 3.10.12. I uninstalled and reinstalled Docker and AlphaFold but I got the same mistakes when trying to run it.
Any support in solving this issue would be highly appreciated.
With best regards,
Rui João Loureiro
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