google-deepmind / google-deepmind/alphafold
Zip result file is not written
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- Python
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Description
I am a new user of colab/alphafold. I ran a fold predicition of an oligomer that seemd to complete normally - the individual PDB and json files were written, but the process seemed to crash when writing the zip file. The name of the zip file was in the file list but I could not download it. These errors were posted. Did I do something wrong?
[/usr/local/lib/python3.9/dist-packages/pydrive/files.py](https://localhost:8080/) in _FilesInsert(self, param)
366 if self.dirty['content']:
367 param['media_body'] = self._BuildMediaBody()
--> 368 metadata = self.auth.service.files().insert(**param).execute(
369 http=self.http)
370 except errors.HttpError as error:
[/usr/local/lib/python3.9/dist-packages/googleapiclient/_helpers.py](https://localhost:8080/) in positional_wrapper(*args, **kwargs)
128 elif positional_parameters_enforcement == POSITIONAL_WARNING:
129 logger.warning(message)
--> 130 return wrapped(*args, **kwargs)
131
132 return positional_wrapper
[/usr/local/lib/python3.9/dist-packages/googleapiclient/http.py](https://localhost:8080/) in execute(self, http, num_retries)
900 body = None
901 while body is None:
--> 902 _, body = self.next_chunk(http=http, num_retries=num_retries)
903 return body
904
[/usr/local/lib/python3.9/dist-packages/googleapiclient/_helpers.py](https://localhost:8080/) in positional_wrapper(*args, **kwargs)
128 elif positional_parameters_enforcement == POSITIONAL_WARNING:
129 logger.warning(message)
--> 130 return wrapped(*args, **kwargs)
131
132 return positional_wrapper
[/usr/local/lib/python3.9/dist-packages/googleapiclient/http.py](https://localhost:8080/) in next_chunk(self, http, num_retries)
1082
1083 try:
-> 1084 resp, content = http.request(
1085 self.resumable_uri, method="PUT", body=data, headers=headers
1086 )
[/usr/local/lib/python3.9/dist-packages/oauth2client/transport.py](https://localhost:8080/) in new_request(uri, method, body, headers, redirections, connection_type)
171 body_stream_position = body.tell()
172
--> 173 resp, content = request(orig_request_method, uri, method, body,
174 clean_headers(headers),
175 redirections, connection_type)
[/usr/local/lib/python3.9/dist-packages/oauth2client/transport.py](https://localhost:8080/) in request(http, uri, method, body, headers, redirections, connection_type)
278 # NOTE: Allowing http or http.request is temporary (See Issue 601).
279 http_callable = getattr(http, 'request', http)
--> 280 return http_callable(uri, method=method, body=body, headers=headers,
281 redirections=redirections,
282 connection_type=connection_type)
[/usr/local/lib/python3.9/dist-packages/httplib2/__init__.py](https://localhost:8080/) in request(self, uri, method, body, headers, redirections, connection_type)
1980 content = b""
1981 else:
-> 1982 (response, content) = self._request(
1983 conn,
1984 authority,
[/usr/local/lib/python3.9/dist-packages/httplib2/__init__.py](https://localhost:8080/) in _request(self, conn, host, absolute_uri, request_uri, method, body, headers, redirections, cachekey)
1683 if redirections:
1684 if "location" not in response and response.status != 300:
-> 1685 raise RedirectMissingLocation(
1686 _(
1687 "Redirected but the response is missing a Location: header."
RedirectMissingLocation: Redirected but the response is missing a Location: header.
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Downloading "hSync1run2_65013.result.zip":
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