google-deepmind / google-deepmind/alphafold

Small BFD species identifications

Open
#687 0 comments 0 reactions 0 assignees View on GitHub
usage question
Dominant language
Python
Stars
14.9k
Forks
2.9k
PR merge metrics
No merged PRs in 30d

Description

Some of the MSA results from running on the small_bfd dataset look like the following: ERR1041385_8320293/50-118. This seems different from what is expected in `msa_identifiers.py,` and such sequences do not show up in UniProt searches. Which database are these sequences (i.e., that start with ERR) from, and does the number after the underscore indicate the species? Thanks!

Contributor guide

Open the contributing guide

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.