google-deepmind / google-deepmind/alphafold
Alphafold Multimer Results
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Description
Hi,
I am wondering if anyone knows a website with Alphafold multimer predicted structures. The reason why I am asking this is that I am interested in exploring the PAE confusion matrix of different oligomeric structures. Also, is anyone aware of any code/rule by which we could say that a particular protein forms a dimer let's say? I know that we can determine that qualitatively by looking at the PAE and myb by looking at the contacts between chains that are less than 8A, but is there a rule for example of how many of such contact points we need to have or any other quantifiable parameter that could be used to determine whether a protein forms a particular oligomer based on the PAE.
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