Switching back to previously loaded scene fails using load_scene_from_packed

### Tested versions

- 4.2 stable

### System information

Godot v4.2.2.stable.mono - Ubuntu 24.04 LTS 24.04 - Wayland - Vulkan (Forward+) - integrated Intel(R) HD Graphics 4400 (HSW GT2) () - Intel(R) Core(TM) i7-4600U CPU @ 2.10GHz (4 Threads)

### Issue description

When assigning ```PackedScene```s in the inspector, switching from scene ```A``` to scene ```B``` using ```get_tree().change_scene_to_packed(scene)``` will not let you go from ```B``` back to ```A``` using the same method, with the status not being ```OK``` (instead, 31 or ```ERR_INVALID_PARAMETER``` is returned).

Using ```status = get_tree().change_scene_to_file(scene.resource_path)``` throws an error instead.

Tested using 3 scenes instead of 2, but ```A -> B -> C``` again doesn't let you go back to ```A``` from ```C```

**Also discovered**
*In three scene mode*
When the project is re-opened, none of the three scenes can be opened, with the ```Broken Dependencies``` popup showing up, without any broken dependencies. Opening up any of the other two scenes will also show up the same error pointing to the next scene, the scene specified in the export field. This problem persists until the reference is removed from the resource file through a text editor.

### Steps to reproduce

Project given.
In the ```script.gd``` file, a boolean parameter is provided to switch between using ```change_scene_to_packed()``` and ```change_scene_to_file()```. An exported ```PackedScene``` is provided as the scene to transition to. The main page (first scene) is just to select which scene to start with, and has no other effect. Other 2 (3 scenes available) scenes have their numbers put on buttons to differentiate them. Pressing the button takes you to the next scene (scene 2 back to scene 1).

### Minimal reproduction project (MRP)

[godot_bug_circular_scene.zip](https://github.com/user-attachments/files/15863498/godot_bug_circular_scene.zip)

Start with the linked minimal reproduction project and inspect its script.gd, exported PackedScene references, and scene transition calls. Reproduce the A → B → A failure with change_scene_to_packed() and compare it with change_scene_to_file(); done means circular transitions work and reopening the project no longer reports broken dependencies.

Written by the indexing model from the issue text.