gcfntnu / gcfntnu/gcf-workflows
singlecell: review and clean up STARsolo-specific workflow
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Description
Review and clean up STARsolo-specific workflow.
Validation note: 10x STARsolo testing exposed remaining legacy coupling between demultiplexing and transcriptomic doublet detection. Demux outputs should no longer share the detector-owned `doublet_score` contract or participate in doublet-output helpers.
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