galaxyproject / galaxyproject/usegalaxy-tools
Configuration problem with metabat2 2.15+galaxy3
- Dominant language
- Shell
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- 22
- Forks
- 70
- Avg merge
- 1d 3h
- Merged PRs (30d)
- 25
Description
tool_id=toolshed.g2.bx.psu.edu/repos/iuc/metabat2/metabat2/2.15+galaxy3
Newer tool with what seems like a configuration problem. (added for Metagenomics pub?)
Output datasets are red with a metadata warning. If imported to another account, turn green but are still empty.
Test data history. First run was at EU, second at ORG
https://usegalaxy.org/u/jen-galaxyproject/h/imported-from-archive-test-metabat2
No job logs written, just the command string.
Xref to ticket for a missing paired tool https://github.com/galaxyproject/usegalaxy-tools/issues/691
Contributor guide
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Research direction
Start with the reported tool_id for metabat2 2.15+galaxy3 and inspect the linked test data history and command string, since no job logs were written. Compare the EU and ORG runs and the imported history; done means the output datasets are populated and no longer show the metadata warning.
Written by the indexing model from the issue text.
Assessment
- Domain
- tooling
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100