galaxyproject / galaxyproject/usegalaxy-tools

Fix-up graphics to support more output types for snpfreqplot at ORG

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Description

toolshed.g2.bx.psu.edu/repos/iuc/snpfreqplot/snpfreqplot/1.0+galaxy3

Test histories. Note that while not failed, some graphic types do not have the sample, file, and other metadata rendered correctly. Getting SVG corrected is probably the most important (for publications).

* **PDF** (only) https://usegalaxy.org/u/jen-galaxyproject/h/test-variant-frequency-plot
* **PDF**, **PNG**, **SVG**, and **JPEG** are ok https://usegalaxy.eu/u/jenj/h/test-variant-frequency-plot

Reported at https://help.galaxyproject.org/t/rendering-svg-from-galaxy/10724. Thanks!

Contributor guide

No contributing guide indexed for this repository

Research direction

Start with the snpfreqplot 1.0+galaxy3 tool and the linked test histories, then compare PDF, PNG, SVG, and JPEG rendering, focusing on missing sample, file, and other metadata. Use the linked Galaxy Help report for reproduction context; done means the output graphics, especially SVG, render the metadata correctly.

Written by the indexing model from the issue text.

Assessment

Domain
data-visualization
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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