galaxyproject / galaxyproject/training-material

notes for scRNA

Open
#975 0 comments 0 reactions 0 assignees View on GitHub
transcriptomics
Dominant language
HTML
Stars
367
Forks
1.1k
Avg merge
16h 27m
Merged PRs (30d)
49

Description

* explain the protocol in the beginning
* barcode figure to the beginning
* separate slide deck
* figure how we put both fastqs together ...?
* amplification bias?
* understanding plates and batches ...
* figure instead of ascii art?
* put that into the slides
* put the numbers in the info field 4096, 1024 and so on ...
* do not call it MPI plate setup

ping @mtekman

Contributor guide

Open the contributing guide

Research direction

Use this issue's scRNA notes as the starting point; clarify the protocol, barcode figure, separate slide deck, FASTQ combination, amplification bias, and plate/batch explanations. Done means the requested material is organized in the training content, figures and numeric details are included, and the MPI plate setup wording is replaced.

Written by the indexing model from the issue text.

Assessment

Domain
content, documentation
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.