galaxyproject / galaxyproject/training-material

Sharing work on COVID19-related tutorials

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#1,863 6 comments 1 reaction 2 assignees Claimed by @simonbray View on GitHub
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Description

If you're interested in writing/contributing to tutorials related to https://covid19.galaxyproject.org/, feel free to add your name and the kind of tutorial you would like to contribute here.
The idea is to come up with a bunch of separate tutorials teaching people the various analysis techniques employed on the covid19 site using some of that same input data.

For a start I'm already adding myself and a few people from Galaxy EU. Note: ticked off boxes do NOT mean that you cannot contribute to these topics. They only indicate that at least one person is volunteering to do work on them. Double assignments are welcome :)

- ~~[x] Data preprocessing for Genomic analyses~~
https://training.galaxyproject.org/training-material/topics/assembly/tutorials/assembly-with-preprocessing/tutorial.html

- [x] nCov2 intra-sample variant calling
@wm75

- ~~[x] Assembly of nCov2 short reads~~
https://training.galaxyproject.org/training-material/topics/assembly/tutorials/assembly-with-preprocessing/tutorial.html

- [ ] S-gene/protein analysis

- [ ] MRCA

- [ ] Evolutionary analysis / Recombination analysis

- ~~[x] Cheminformatics~~
https://training.galaxyproject.org/training-material/topics/computational-chemistry/tutorials/covid19-docking/tutorial.html

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