galaxyproject / galaxyproject/training-material

Tutorials missing workflows

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CoFest Hacktoberfest help-wanted newcomer-friendly paper-cut
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Description

This is a list of tutorials that are missing a workflow, if anybody would like to run this tutorial and extract the workflow from their history afterwards and upload it here, this would be a great help for us!
- [ ] **Topic**: computational-chemistry **Tutorial**: setting-up-molecular-systems [Link](https://training.galaxyproject.org/training-material/topics/computational-chemistry/tutorials/setting-up-molecular-systems/tutorial.html)
- [x] **Topic**: ecology **Tutorial**: species-distribution-modeling [Link](https://training.galaxyproject.org/training-material/topics/ecology/tutorials/species-distribution-modeling/tutorial.html)
- [x] **Topic**: epigenetics **Tutorial**: tal1-binding-site-identification [Link](https://training.galaxyproject.org/training-material/topics/epigenetics/tutorials/tal1-binding-site-identification/tutorial.html)
- [ ] **Topic**: genome-annotation **Tutorial**: genome-annotation [Link](https://training.galaxyproject.org/training-material/topics/genome-annotation/tutorials/genome-annotation/tutorial.html)
- [x] **Topic**: genome-annotation **Tutorial**: tnseq [Link](https://training.galaxyproject.org/training-material/topics/genome-annotation/tutorials/tnseq/tutorial.html)
- [x] **Topic**: introduction **Tutorial**: galaxy-intro-101 [Link](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-101/tutorial.html)
- [ ] **Topic**: introduction **Tutorial**: galaxy-intro-ngs-data-managment [Link](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-ngs-data-managment/tutorial.html)
- [x] **Topic**: introduction **Tutorial**: galaxy-intro-peaks2genes [Link](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-peaks2genes/tutorial.html)
- [x] **Topic**: introduction **Tutorial**: igv-introduction [Link](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/igv-introduction/tutorial.html)
- [ ] **Topic**: introduction **Tutorial**: r-basics [Link](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/r-basics/tutorial.html)
- [x] **Topic**: proteomics **Tutorial**: labelfree-vs-labelled [Link](https://training.galaxyproject.org/training-material/topics/proteomics/tutorials/labelfree-vs-labelled/tutorial.html)
- [x] **Topic**: transcriptomics **Tutorial**: rb-rnaseq [Link](https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/rb-rnaseq/tutorial.html)
- [ ] **Topic**: transcriptomics **Tutorial**: rna-seq-counts-to-viz-in-r [Link](https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/rna-seq-counts-to-viz-in-r/tutorial.html)
- [x] **Topic**: transcriptomics **Tutorial**: scrna-plates-batches-barcodes [Link](https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/scrna-plates-batches-barcodes/tutorial.html)
- [x] **Topic**: transcriptomics **Tutorial**: scrna-umis [Link](https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/scrna-umis/tutorial.html)
- [x] **Topic**: variant-analysis **Tutorial**: non-dip [Link](https://training.galaxyproject.org/training-material/topics/variant-analysis/tutorials/non-dip/tutorial.html)
- [x] **Topic**: variant-analysis **Tutorial**: somatic-variants [Link](https://training.galaxyproject.org/training-material/topics/variant-analysis/tutorials/somatic-variants/tutorial.html)

And if you run into any other issues or questions when doing the tutorial, please add a fix or file an issue for it :)

Contributor guide

Open the contributing guide

Research direction

Start with the unchecked tutorial links in the issue: setting-up-molecular-systems, genome-annotation, galaxy-intro-ngs-data-managment, r-basics, and rna-seq-counts-to-viz-in-r. Run each tutorial, extract the workflow from its history, and upload it with the corresponding tutorial. Done means the missing workflows are added and the checklist entries can be marked complete.

Written by the indexing model from the issue text.

Assessment

Domain
content, documentation
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
30/100

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