galaxyproject / galaxyproject/training-material
Peptide and Protein ID doesnt work
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proteomics
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Description
https://github.com/galaxyproject/training-material/blob/master/topics/proteomics/tutorials/protein-id-sg-ps/tutorial.md
I think this tutorial needs to be updated. The files cannot be converted..can we use msconvert vendor support directly to convert raw to mgf?? then use SGPS?
Contributor guide
Research direction
Start with topics/proteomics/tutorials/protein-id-sg-ps/tutorial.md and reproduce the reported file-conversion failure. Investigate whether msconvert vendor support can convert raw files to MGF for use with SGPS. Done means the tutorial documents a working conversion and protein-identification path.
Written by the indexing model from the issue text.
Assessment
- Domain
- documentation
- Issue type
- Documentation
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100