galaxyproject / galaxyproject/tpv-shared-database

Add rule for ```recetox_aplcms_compute_clusters``` to scale memory according to the input.

Open
#74 1 comment 0 reactions 0 assignees View on GitHub
Dominant language
No language data
Stars
12
Forks
20
PR merge metrics
No merged PRs in 30d

Description

The tool currently has no config (so I assume 4GB by default?) and crashes when being given about 1GB of input data.

So I assume a rule like this would make sense?

```
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_compute_clusters/recetox_aplcms_compute_clusters/.*:
mem: 4
rules:
- id: rcx_aplcms_clusters_large_input
if: input_size >= 0.8
mem: 8
```

Is it also possible to stack these rules, so to provide even more memory if the input is even bigger?

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.