galaxyproject / galaxyproject/tools-devteam

Enhancement: Upgrade Fastq interlacer 1.2.0 and de-interlacer 1.1.1 to work with Illumina 1.8+ identifiers

Open
#488 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
37
Forks
94
PR merge metrics
No merged PRs in 30d

Description

Tools work with Illumina 1.3-1.7 sequence identifiers plus any that have had /1 and /2 added, but do not work with default Illumina 1.8+ sequence identifiers.

MTS Repos:

https://toolshed.g2.bx.psu.edu/view/devteam/fastq_paired_end_interlacer/effda79f510c
https://toolshed.g2.bx.psu.edu/view/devteam/fastq_paired_end_deinterlacer/462abc5618ba

Perhaps bundle with this change: https://github.com/galaxyproject/tools-devteam/issues/487

Contributor guide

Open the contributing guide

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.