galaxyproject / galaxyproject/planemo
output_collection file comparison is seemingly ignored
Open
- Dominant language
- Python
- Stars
- 110
- Forks
- 102
- Avg merge
- 4d 21h
- Merged PRs (30d)
- 13
Description
I have a tool with a test like:
```
...
```
irrespective of the content of the the bam files the test is successful. Same if compare="diff".
The `` are not completely ignored: if I give a wrong file name the test fails.
Contributor guide
Research direction
Locate the handling for Galaxy tool-test output_collection elements and reproduce the XML example with differing BAM contents. Check why compare="sim_size" and compare="diff" do not affect the result while an incorrect file name does; done means content comparisons fail when expected and pass for matching outputs.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- testing
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100