galaxyproject / galaxyproject/iwc

Autoupdate errors

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Description

Mon Sep 30 15:48:59 UTC 2024, there were errors when running autoupdate

Cannot autoupdate workflows/computational-chemistry/gromacs-dctmd, last line of stderr is
bioblend.ConnectionError: Unexpected HTTP status code: 400: {"err_msg":"Workflow step has upgrade messages","err_code":0,"err_data":{"6":{"appendproperties":"No value found for 'Molecular properties to append to the title.'."}}}
Cannot autoupdate workflows/computational-chemistry/gromacs-mmgbsa, last line of stderr is
bioblend.ConnectionError: Unexpected HTTP status code: 400: {"err_msg":"Workflow step has upgrade messages","err_code":0,"err_data":{"6":{"appendproperties":"No value found for 'Molecular properties to append to the title.'."}}}

Contributor guide

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Research direction

Start by running autoupdate for workflows/computational-chemistry/gromacs-dctmd and workflows/computational-chemistry/gromacs-mmgbsa, then inspect the reported bioblend HTTP 400 details. Trace the upgrade handling for the appendproperties step and establish what change makes both workflows complete without upgrade messages.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
tooling
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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