galaxyproject / galaxyproject/iwc
Workflow to concatenate fastqs from different lanes
Open
- Dominant language
- Vue
- Stars
- 57
- Forks
- 97
- Avg merge
- 5d 7h
- Merged PRs (30d)
- 17
Description
It would be good to have a workflow which takes as input a collection with fastqs from different lanes and concatenate if needed samples from the same samples.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start from the issue description and review existing Galaxy workflow conventions for collection inputs containing FASTQs from multiple lanes. Clarify how samples are identified and when concatenation is needed; done means a workflow accepts the collection and correctly combines FASTQs belonging to the same sample.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100