galaxyproject / galaxyproject/idc
Request: update blast indexes
Open
- Dominant language
- Shell
- Stars
- 10
- Forks
- 8
- PR merge metrics
- No merged PRs in 30d
Description
The current version is over a year old at the UseGalaxy servers: sep 2023
xref https://ftp.ncbi.nlm.nih.gov/blast/db/
Requested at https://help.galaxyproject.org/t/request-to-update-blastp-nr-database/14994
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating the repository entry point or scripts responsible for BLAST index data, then compare the configured version with the NCBI BLAST database listing linked in the issue. Done means the UseGalaxy servers use indexes newer than the September 2023 version and the requested update is reflected in the repository or deployment process.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- shell
- Domain
- bioinformatics, databases
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100