Suite ID without Tool IDs

While looking into https://github.com/galaxyproject/galaxy_codex/issues/346
I found tools without Tool IDs ... we should check those cases and add functionality to skip those.

Suite ID | Suite parsed folder
-- | --
suite_plasmid_profiler | https://github.com/phac-nml/galaxy_tools/tree/master/tools/plasmid_profiler_suite
suite_qiime2_core | https://github.com/qiime2/galaxy-tools/tree/main/tool_collections/suite_qiime2_core
diffbind | https://github.com/bgruening/galaxytools/tree/master/tools/diffbind
glimmer_hmm | https://github.com/bgruening/galaxytools/tree/master/tools/glimmer_hmm
homer | https://github.com/bgruening/galaxytools/tree/master/tools/homer
inforna | https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/inforna
iprscan5 | https://github.com/bgruening/galaxytools/tree/master/tools/iprscan5
kinwalker | https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/kinwalker
samtools | https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/samtools
custom_pro_db_annotation_data_manager | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/probam_suite/custom_pro_db_annotation_data_manager
data_manager_eggnog_mapper | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/data_manager_eggnog_mapper
data_manager_eggnog_mapper_abspath | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/data_manager_eggnog_mapper_abspath
decoyfasta | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/decoyfasta
directag_and_tagrecon | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/directag_and_tagrecon
freeenergy | https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/tree/master/tools/free_energy
ltq_iquant_cli | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ltq_iquant_cli
pepxml_to_xls | https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pepxml_to_xls
suite_snvphyl_1_2_3 | https://github.com/phac-nml/snvphyl-galaxy/tree/development/tools/suite_snvphyl
vmd | https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/tree/master/tools/vmd