galaxyproject / galaxyproject/galaxy
plug in openSNP as data source
Open
feature-request
help wanted
kind/enhancement
- Dominant language
- Python
- Stars
- 1.9k
- Forks
- 1.2k
- Avg merge
- 2d 23h
- Merged PRs (30d)
- 158
Description
https://opensnp.org/
~2000 individuals genotype+fenotype totally opensource and CC licensed
Contributor guide
Research direction
Start by reviewing the openSNP site and Galaxy's existing data-source integrations; the issue names no files, tests, or entry points. Determine how genotype and phenotype data from openSNP should be connected to Galaxy, then verify that the source can be used through the intended workflow.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics, data
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100