Gene models and community annotations to UCSC

With @NullModel 's help, I'm in the process of creating bed files with the gene models (should be pretty fast from here) and Apollo annotations (slightly slower but shouldn't be too bad) obtained from VEuPathDB. The current workflow looks like this:

1. Create a mapping hash between the VEuPathDB assembly names and NCBI accessions; this is nearly done. @NullModel did most of the work already and I just have to massage the list a little bit.
2. Use an existing script I already have to convert the gene model GFF to bigbed; organize and hand a tarball to @NullModel (note that in the past, this would have been a fairly time consuming step as I would have had to figure out how to map chromosome and contig names as well, but @NullModel has already handled it.
3. Do the same for the community annotation GFFs. This might require a small amount of massaging to get ready, but again, shouldn't be too time consuming.