Roadmap

### Assemblies
- [Fungi Assemblies](https://github.com/galaxyproject/brc-analytics/issues/790) 1️⃣
- [Bacterial assemblies](https://github.com/galaxyproject/brc-analytics/issues/798) 2️⃣ ✔️
- ~~[All RefSeq/GenBank Assemblies](https://github.com/galaxyproject/brc-analytics/issues/799) (About 50k)~~
- [Helminths](https://github.com/galaxyproject/brc-analytics/pull/667) 2️⃣ ✔️

### ENA Search
- [Stepper/ENA Picker Refinements](https://github.com/galaxyproject/brc-analytics/issues/723) 1️⃣
- [Keyword search](https://github.com/galaxyproject/brc-analytics/issues/726) 1️⃣
- [Regularly updatable DB Backend](https://github.com/galaxyproject/brc-analytics/issues/710) 1️⃣
- [LLM Interface](https://github.com/galaxyproject/brc-analytics/issues/766) 2️⃣

### New Workflows
- [Variants workflow for non-haploid organisms](https://github.com/galaxyproject/brc-analytics/issues/304) 1️⃣

### Workflow Launching
- [Create an Assembly](https://github.com/galaxyproject/brc-analytics/issues/705) 3️⃣
- [Custom workflow (Upload data only)](https://github.com/galaxyproject/brc-analytics/issues/288) 1️⃣
- [With a different reference besides an assembly (Flu)](https://github.com/galaxyproject/brc-analytics/issues/532) 2️⃣

### Workflow Run Report
- [Prioritize a workflow to develop a demo with: Fungal RNAseq](https://github.com/galaxyproject/brc-analytics/issues/809) 2️⃣
- [Reports for all IWC workflows over time.](https://github.com/galaxyproject/brc-analytics/issues/810) 3️⃣
- [How can we start "Gallery" or on the Analyze tab... (we can start with a white paper on measles)](https://github.com/galaxyproject/brc-analytics/issues/802) 1️⃣

### Killer Apps
- [LoganSearch](https://github.com/galaxyproject/brc-analytics/issues/804) 2️⃣
- [LexicMap](https://github.com/galaxyproject/brc-analytics/issues/803) 1️⃣

### Galaxy Integration
- ~~Launching analyses without workflows~~ 1️⃣ (dupe of https://github.com/galaxyproject/brc-analytics/issues/288)
- [Integrate workflow reports](https://github.com/galaxyproject/brc-analytics/issues/811)
- [Login/Access to users Galaxy API](https://github.com/galaxyproject/brc-analytics/issues/812)

### Papers
- [Measles](https://github.com/galaxyproject/brc-analytics/issues/805) 1️⃣
- [C. auris / Fungi](https://github.com/galaxyproject/brc-analytics/issues/806) 2️⃣
- [Something that uses RNA-Seq](https://github.com/galaxyproject/brc-analytics/issues/807) 2️⃣

### Homepage
- [Update home page to focus on white papers](https://github.com/galaxyproject/brc-analytics/issues/808) 1️⃣

### Conferences
- MPM Sept 14 Woods Hole
- Genome Informatics Nov CSHL

### User acquisition

- See conferences
- [Weekly social media posts starting Sept 1st](https://github.com/galaxyproject/brc-analytics/issues/737) 1️⃣
- [Link out from NCBI Datasets and possibly SRA](https://github.com/galaxyproject/brc-analytics/issues/783) 1️⃣
- Papers, screencasts
- Large-scale ingestion of RNA-seq data for fungi