galaxyproject / galaxyproject/brc-analytics

Review workflows for additional filterers required on input

Open
#523 1 comment 0 reactions 1 assignee Claimed by @mvdbeek View on GitHub
Dominant language
TypeScript
Stars
7
Forks
11
Avg merge
2d 12h
Merged PRs (30d)
16

Description

#### Need
Workflows require data of specific types. We have indicators for types in general such as "Assembly", "Gene Model " and "Read Run" but some times we will want to filter by additional criteria to match the data to the workflow.

For example, we may want to filter Read Run by:

1. paired-end or single-end reads
2. Technology (Long Read or Short Read)
3. Organism - some workflows only take specific organisms.

#### Ask

Review the workflows and develop a candidate list of additional metadata values to tag each workflow to indicate additional filters on the main data types. Once we have this list, we can work on a technical design to communicate these requirements to BRC using the workflow metadata sync capability we have previously developed.

The goal would be to support a UI experience in the BRC workflow stepper where the ENA popup can expose filters to help the selected data match the workflow requirements. These filters would be dismissible by the user in the case they needed to be overridden.

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.