Biological questions

## What we have

- 901 species from all domain and all major taxonomic groups
- a wide variety of workflow for variation, assembly, transcriptomics, metagenomics, metabolomics, gene regulation
- we can query SRA data directly
- a one-of-the-kind ability to run lexicmap against SRA is coming

## What can we do:

### Mpox

- Create a workflow for alignment and variant identification from assembled genomes

### *Plasmodium*

- Create a workflows for variant calling which then continues into haplotype network reconstruction and displaying geographic distribution
- Assembly workflows for various *Plasmodium* species