galaxyproject / galaxyproject/brc-analytics
Scale Genome Assembly Page for Comparative Genomics
- Dominant language
- TypeScript
- Stars
- 7
- Forks
- 11
- Avg merge
- 3d 15h
- Merged PRs (30d)
- 15
Description
This will likely need refinement, sub-issues as the need becomes clearer.
## Summary
As we prepare to ingest large numbers of assemblies per organism, the current curated, hand-picked list won’t scale. We need to redesign ingestion, storage, and UI to support large datasets while keeping the experience fast and discoverable.
## Motivation / Problem
- Performance will degrade if we try to render giant lists or naive queries.
- Users won’t be able to find relevant assemblies without meaningful filtering/sorting.
- Comparative genomics workflows will need broad coverage per organism, so manual curation is no longer viable.
## Goals
- Automate pulling bulk assemblies per organism (no hand-curation).
- Ensure backend/API can return paginated, filterable assembly data quickly.
- Keep the “featured reference” experience for curated genomes while exposing the larger pool for workflows.
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