galaxyproject / galaxyproject/brc-analytics
support intersection in primary contrasts
- Dominant language
- TypeScript
- Stars
- 7
- Forks
- 11
- Avg merge
- 2d 12h
- Merged PRs (30d)
- 16
Description
so when i saw where we landed w the de stepper ui, i realized we could fairly easily expand to support intersections w * in deseq design formulas.. wed have to make the primary contrasts choice support multiple sections, so radio -> checkboxes. then the design formula would iirc become something like:
~ covariate + primary1 * primary2
probably important to tell ppl when to use it, something like:
Interactions test whether the effect of one variable depends on another.
Use interactions only when you expect different biological effects across groups and have samples for all combinations of factors.
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