galaxyproject / galaxyproject/alignment-pipeline
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Description
- list of UCSC multi alignments: https://genomewiki.ucsc.edu/index.php?title=UCSC_Multiple_Alignments
- common UCSC lastz parameter matrices: https://genomewiki.ucsc.edu/index.php/Hg19_conservation_lastz_parameters
- multiz caveats https://genomewiki.ucsc.edu/index.php?title=Lastz/chain/net/multiz_considerations/caveats/restrictions/limitations
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