Some metadata do not deploy on profiles if more than one file per profile exists

### Summary

`sf project deploy start ` doesn't deploy metadata when more than 1 profile file exists.

### Steps To Reproduce

Repository to reproduce [sfProfileIssues](https://github.com/mlipinski307/sfProfileIssue)

1. Create new scratch org
2. Run `sf project deploy start ` to deploy 3 layouts and System Admin profile that contains only layout assignment.
3. Note that deployment was successful but Account layout assignment didnt change on scratch org.

### Expected result
Layout assignment for Admin profile should change to Account-A

### Actual result
Layout assignment for Admin profile do not change at all

### Additional information
Looks like similar issue to https://github.com/forcedotcom/cli/issues/2230

### System Information

```
CLI:
@salesforce/cli/2.73.9 win32-x64 node-v18.16.0

Plugin Version:
@oclif/plugin-autocomplete 3.2.17 (core)
@oclif/plugin-commands 4.1.16 (core)
@oclif/plugin-help 6.2.21 (core)
@oclif/plugin-not-found 3.2.35 (core)
@oclif/plugin-plugins 5.4.25 (core)
@oclif/plugin-search 1.2.18 (core)
@oclif/plugin-update 4.6.23 (core)
@oclif/plugin-version 2.2.20 (core)
@oclif/plugin-warn-if-update-available 3.1.30 (core)
@oclif/plugin-which 3.2.25 (core)
@salesforce/cli 2.73.9 (core)
apex 3.6.8 (core)
api 1.3.3 (core)
auth 3.6.87 (core)
community 3.0.2 (user)
custom-metadata 3.0.3 (user)
data 4.0.1 (core)
deploy-retrieve 3.17.7 (core)
info 3.4.32 (core)
limits 3.3.44 (core)
marketplace 1.3.7 (core)
org 5.2.23 (core)
packaging 1.27.2 (user)
schema 3.3.46 (core)
settings 2.4.10 (core)
signups 1.4.13 (user)
sobject 1.4.49 (core)
telemetry 3.6.29 (core)
templates 56.3.35 (core)
trust 3.7.55 (core)
user 3.6.6 (core)
@salesforce/sfdx-scanner 3.18.0 (user)
aura-helper-sfdx 1.2.2 (user)
```

```
SF ENV. VARS.
SF_AUTOUPDATE_DISABLE,true
SF_DISABLE_AUTOUPDATE,true
SF_UPDATE_INSTRUCTIONS,Use "npm update --global @salesforce/cli" to update npm-based installations.
```

```
Windows: true
Shell: C:\Users\mlipinski\AppData\Local\Programs\Git\usr\bin\bash.exe
Channel: stable
```
---
### Diagnostics
:white_check_mark: pass - salesforcedx plugin isn’t installed
:white_check_mark: pass - you don't have any linked plugins
:white_check_mark: pass - [@salesforce/plugin-trust] can ping: https://registry.npmjs.org
:white_check_mark: pass - [@salesforce/plugin-trust] can ping: https://registry.yarnpkg.com
:white_check_mark: pass - [@salesforce/plugin-trust] can ping: https://registry.npmjs.org/
:white_check_mark: pass - using latest or latest-rc CLI version
:white_check_mark: pass - [@salesforce/plugin-deploy-retrieve] sourceApiVersion matches apiVersion
:white_check_mark: pass - [@salesforce/plugin-deploy-retrieve] sourceApiVersion matches default target org max apiVersion
:white_check_mark: pass - can access: https://test.salesforce.com
:white_check_mark: pass - can access: https://appexchange.salesforce.com/services/data
:white_check_mark: pass - can access: https://developer.salesforce.com/media/salesforce-cli/sf/channels/stable/sf-win32-x64-buildmanifest
:x: fail - [@salesforce/plugin-auth] CLI supports v2 crypto
:white_check_mark: pass - [@salesforce/plugin-auth] CLI using stable v1 crypto