Support autodetection for macromolecules file formats
- Dominant language
- C++
- Stars
- 406
- Forks
- 134
- Avg merge
- 2d 11h
- Merged PRs (30d)
- 24
Description
**Background**
Currently convert api method allows to detect file format automatically if parameter input_format: chemical/x-unknown passed.
However for sequence and fasta formats it is impossible to identify which type of sequence need to be converted (peptide, rna or dna).
**Solution**
Introduce new parameter monomer_type: and format autodetection for sequence ans fasta formats.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start at the convert API's existing input_format autodetection path and inspect how sequence and fasta formats are handled. Define the monomer_type parameter with RNA, DNA, and PEPTIDE values, then verify that autodetection distinguishes these sequence types and that conversion succeeds for each format.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- cpp
- Domain
- api
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100