epam / epam/Indigo

Clean Up causes internal sever error if atom(s) with mapping tool selected

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#1,670 1 comment 0 reactions 1 assignee Claimed by @AliaksandrDziarkach View on GitHub
Micromolecules canvas Priority: Medium
Dominant language
C++
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406
Forks
134
Avg merge
2d 11h
Merged PRs (30d)
24

Description

**Environment details (please complete the following information):**
- Ketcher Version 2.18.0-rc.4 Build at 2024-02-06; 13:45:28
- Indigo Toolkit Version 1.18.0-rc.6.0-g98bf384e0-x86_64-linux-gnu-11.2.1
- Chrome Version 121.0.6167.161 (Official Build) (64-bit)
- Win10
- Issue found while testing https://github.com/epam/ketcher/issues/3934

**Steps to Reproduce**
1. Create reaction as shown on the screen
![image](https://github.com/epam/ketcher/assets/26869421/24b07508-3699-4d03-a876-bf67ad95cf00)
OR
1. Open from file as a New Project: [Clean Up causes internal sever error if atom(s) with mapping tool selected.zip](https://github.com/epam/Indigo/files/14206581/Clean.Up.causes.internal.sever.error.if.atom.s.with.mapping.tool.selected.zip)
2. Press Ctrl+A (Select All)
3. Press Ctrl+Shift+L (Clean Up)

**Actual behavior**
System throws exception: iterate_selected_submolecules() missing 1 required positional argument: 'indigo'
![image](https://github.com/epam/ketcher/assets/26869421/dd889333-0d2c-4017-92ed-f92392d5ad4b)
![image](https://github.com/epam/ketcher/assets/26869421/1bc15973-d0f6-467c-93d3-904690a4f6c3)
[rc.test.lifescience.opensource.epam.com-1707382553126.log](https://github.com/epam/ketcher/files/14206516/rc.test.lifescience.opensource.epam.com-1707382553126.log)

**Expected behavior**
No exception

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Assessment

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