Eclipse rename package issue

In our codebase package was accidentally defined as abcXyz. But when tried to rename it got unexpected results

Steps to reproduce:
- Select package with given name
- Press rename package
- In open dialog check: update references + update sub-packages
- Change name to expected value
- Press ok

Expectation:
- package name is changed to new one (in package/project explorer)
- classes in package have correct package (new value)
- references to classes are updated accordingly (e.g. reference to class with new package name)

Actual:
- package name is changed to new one (in package/project explorer) - YES
- classes in package have correct package (new value) - NO
- references to classes are updated accordingly (e.g. reference to class with new package name) - YES

Java: jdk 24
Version: 2025-03 (4.35.0)
Build id: 20250306-0812