eastgenomics / eastgenomics/eggd_plot_variant_baf

Filter common variants

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Description

BAF plot can be noisy, particularly if used for larger captures, so it would be good to filter out some more noise. Using gnomad etc to get rid of common variants might help this. https://bernatgel.github.io/karyoploter_tutorial/Examples/SNPArray/SNPArray.html

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