typescript-operations plugin duplicates fragment type when document is matched twice

originally reported as: https://github.com/dotansimha/graphql-code-generator/issues/10170

### Which packages are impacted by your issue?

@graphql-codegen/near-operation-file-preset

### Describe the bug

When `typescript-operations` plugin is used with `@graphql-codegen/near-operation-file-preset` and the documents config has overlapping patterns meaning a file is matched by more than a single pattern the generated file contains multiple type exports with conflicting name.

### Your Example Website or App

https://stackblitz.com/edit/github-kq5wbr?file=codegen.ts,src%2Ffragment.generated.ts

### Steps to Reproduce the Bug or Issue

1. Go to `src/fragment.generated.ts` and see `MyExampleFragment` is duplicated
2. Go to `codegen.ts`
3. Comment out `'src/fragment.graphql',` from the documents config
4. Run `yarn generate`
5. See that `src/fragment.generated.ts` has no duplication

### Expected behavior

There is no duplication regardless of overlapping documents configuration

### Screenshots or Videos

_No response_

### Platform

- OS: macOs
- NodeJS: 20.10.0
- `graphql` version: 16.9.0
- `@graphql-codegen/*` version(s): 4.0.1
- `@graphql-codegen/near-operation-file-preset`: 3.0.0

### Codegen Config File

```ts
import { CodegenConfig } from '@graphql-codegen/cli';

const config: CodegenConfig = {
schema: 'schema.graphql',
documents: [
'document.graphql',
'src/*.graphql',
// Enforce duplication, fragment is already matched by the rule above
// comment out the next line to prevent duplication
'src/fragment.graphql',
],
generates: {
'types.ts': {
plugins: ['typescript'],
},
src: {
preset: 'near-operation-file',
plugins: ['typescript-operations'],
presetConfig: {
baseTypesPath: '../types.ts',
},
},
},
};

export default config;
```

### Additional context

#### Symptoms
The generated file:
```ts
import * as Types from '../types';

export type MyExampleFragment = { __typename?: 'User', id: string, username: string };

export type MyExampleFragment = { __typename?: 'User', id: string, username: string };
```

#### Research

Documents here
https://github.com/dotansimha/graphql-code-generator/blob/a23505180ac2f275a55ece27162ec9bfcdc52e03/packages/plugins/typescript/operations/src/index.ts#L14

carry the duplicated fragment SDL
```
[
{
rawSDL: 'fragment MyExample on User {\n' +
' id\n' +
' username\n' +
'}fragment MyExample on User {\n' +
' id\n' +
' username\n' +
'}',
document: { kind: 'Document', definitions: [Array] },
location: '...'
}
]
```

without the preset they are 2 documents:
```
[
{
location: '...',
document: { kind: 'Document', definitions: [Array] },
rawSDL: 'fragment MyExample on User {\n id\n username\n}',
hash: '...'
},
{
location: '....',
document: { kind: 'Document', definitions: [] },
rawSDL: 'fragment MyExample on User {\n id\n username\n}',
hash: '...'
}
]
```