Handle LinkML migration issue of `pydantic2linkml: Unable to translate the logic contained in the after validation function`
- Dominant language
- Python
- Stars
- 7
- Forks
- 15
- PR merge metrics
- No merged PRs in 30d
Description
pydantic2linkml complains about not able to translate the logic in validation function as in
or via `grep -n -A1 "Unable to translate the logic contained in the after validation" dandischema/models.yaml`.
## Cause
These are the result of pydantic2linkml not able translate runtime logic in Pydantic validation functions to LinkML.
## Stats
The validation functions that are causing the complains:
| Function | Count | Lines in `models.yaml` the complain appears|
|----------|-------|-------|
| `AccessRequirements.open_or_embargoed` | 1 | 331 |
| `Contributor.ensure_contact_person_has_email` | 5 | 419, 423, 719, 732, 736 |
| `dandischema.models.BareAsset.digest_check` | 1 | 461 |
| `dandischema.models.DandiBaseModel.ensure_schemakey` | 1 | 658 |
| `dandischema.models.PropertyValue.ensure_value` | 1 | 703 |
| `pydantic.networks.EmailStr._validate` | 1 | 487 |
| `pydantic.types.ByteSize._validate` | 1 | 395 |
| `Resource.identifier_or_url` | 1 | 631 |
Total complains: 12
## Solution
The runtime logic in each Pydantic validation function has to be evaluated individually for translation.
Contributor guide
No contributing guide indexed for this repository
Assessment
This issue has not been assessed yet.