daisybio / daisybio/SPONGE

ceRNA interactions : How to get the names of shared miRNAs?

Open
#3 1 comment 0 reactions 0 assignees View on GitHub
Dominant language
R
Stars
14
Forks
9
PR merge metrics
No merged PRs in 30d

Description

While using the sponge function, result is a data table with both genes (A and B), the number of miRNAs (), gene-gene correlation (), partial correlation given all miRNAs () and the values, i.e. mscor=cor−pcor.
I want the name of these shared miRNAs whose number is listed in column 3. Can anybody help me with this? Or if in anyway i could get all the three nodes by using some other function?

Hoping for earliest response.
Thanking you in advance.

Best
Lipika

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.