cytomining / cytomining/profiling-recipe
Create dvc for files in the gct folder
- Dominant language
- Python
- Stars
- 11
- Forks
- 34
- PR merge metrics
- No merged PRs in 30d
Description
[Currently](https://github.com/cytomining/profiling-recipe/tree/d7012751cf24e9aa1325e099b03aaf74fe2578d6), only the profiles (`*.csv.gz`) in the `profiles` folder are `dvc` while the files in the `gct` folder are still stored in GitLFS. This should be changed so that the files in the `gct` folder are also included while creating the `.dvc` files.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by comparing the existing DVC setup for the profiles folder with the files under gct, using the linked repository snapshot as context. Identify how the current .dvc files are created and extend that same process to gct; done means the gct files are tracked by DVC rather than Git LFS.
Written by the indexing model from the issue text.
Assessment
- Domain
- tooling
- Issue type
- Refactor
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100