cytomining / cytomining/CytoTable

Develop a cytotable.annotate function to incorporate metadata

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#44 7 comments 1 reaction 1 assignee Claimed by @d33bs View on GitHub
enhancement question
Dominant language
Python
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Description

Based on the tests, it seems like the convert function should work the same as using Pycytominer `Single Cells`, where we merge the single cells from the database with the corresponding metadata.

After running this function, I can see that this was not the case.

For clarification, should the `convert` function be able to merge single cells (e.g. with the compartments being able to associate the objects together to get a file with all single cells) along with converting to parquet?

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