cytomining / cytomining/CytoTable
Detect compartments in the single cell input file and throw a warning if they are not used
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bug
enhancement
- Dominant language
- Python
- Stars
- 21
- Forks
- 6
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 6
Description
In cytomining/pycytominer#111 - I add a method in the `cells.py` class to merge tables using predefined "linking" columns.
If there are more than the default compartments in the provided input file (e.g. single cell SQLite), then the `merge_single_cells()` method will silently ignore the additional compartments **if the method is not used properly**.
We should throw a warning if there is a missing table not used.
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