cytomining / cytomining/CytoTable

Enhance compartment schema specification for compartment data source groups

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enhancement
Dominant language
Python
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Merged PRs (30d)
6

Description

- Improve the ability for pycytominer-transform to handle groups of compartment data sources which may have different columns and/or datatypes by inference
- Do the same for column and datatype specification using a specific expected schema (instead of, for example, relying on the "first" file encountered by a procedure).

Referencing cytominer-database design where appropriate: https://github.com/cytomining/cytominer-database/blob/9cf43400a01b82e4b4bce0901e039b7f24519ffe/README.rst#the-schema-section

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