Print function is not printing in stdout of function KCL pod.

### What happened?

`print(...)` no longer print into function KCL pod logs.

### How can we reproduce it?

using `v0.12.3` function KCL, while `v0.12.1` was able to print composition pipeline logs into the function KCL pod.

Tried `--debug` debug mode was turn on through `DeploymentRuntimeConfig`, still not working.

### What environment did it happen in?
Function version: v0.12.3
Crossplane version: v2.3.4

Start by reproducing the missing print output with function KCL v0.12.3 and Crossplane v2.3.4, then compare it with v0.12.1 and the DeploymentRuntimeConfig debug setting. Inspect the function's logging path and pod logs; done means print(...) output appears in the KCL function pod logs as expected.

Written by the indexing model from the issue text.